ESMFold2-600
File List
- model.safetensors 682.7 MB
- fastplms_bundle.py 544.3 KB
- fastplms/models/esmfold2/modeling_esmfold2_common.py 122.4 KB
- fastplms/models.toml 96.4 KB
- fastplms/models/esm_plusplus/modeling_esm_plusplus.py 86.7 KB
- fastplms/models/esmfold2/modeling_esmfold2.py 85.5 KB
- fastplms/registry.py 78.4 KB
- fastplms/features/store.py 76.6 KB
- fastplms/embeddings/storage.py 65.2 KB
- fastplms/models/esmfold2/esmfold2_protein_chain.py 62.1 KB
- fastplms/models/esmfold2/esmfold2_protein_complex.py 51.5 KB
- fastplms/models/esmfold2/modeling_esmfold2_experimental.py 49.1 KB
- fastplms/models/esmfold2/esmfold2_molecular_complex.py 40.3 KB
- fastplms/models/esmfold2/esmfold2_prepare_input.py 39.8 KB
- fastplms/attention/_core.py 37.4 KB
- fastplms/models/ttt.py 36.9 KB
- fastplms/models/esmfold2/esmfold2_residue_constants.py 32.1 KB
- fastplms/embeddings/batches.py 29.4 KB
- fastplms/embeddings/runner.py 26.9 KB
- fastplms/models/esmfold2/esmfold2_affine3d.py 24.2 KB
- fastplms/features/reader.py 24.2 KB
- preparation-record.json 23.8 KB
- fastplms/embeddings/identity.py 22.0 KB
- fastplms/embeddings/token_batches.py 20.7 KB
- fastplms/models/esmfold2/esmfold2_msa.py 20.4 KB
- fastplms/models/classification_probe.py 19.9 KB
- fastplms/features/async_writer.py 18.5 KB
- fastplms/embeddings/taps.py 17.6 KB
- fastplms/models/esmfold2/esmfold2_conformers.py 17.5 KB
- fastplms/attention/interfaces.py 16.6 KB
- fastplms/models/esmfold2/esmfold2_mmcif_parsing.py 16.2 KB
- fastplms/models/esmfold2/esmfold2_misc.py 15.8 KB
- fastplms/features/layouts.py 15.5 KB
- fastplms/models/esmfold2/configuration_esmfold2.py 14.5 KB
- README.md 13.9 KB
- fastplms/embeddings/token_runs.py 13.1 KB
- fastplms/embeddings/pooling.py 13.0 KB
- fastplms/models/esmfold2/esmfold2_processor.py 12.9 KB
- fastplms/embeddings/inputs.py 12.5 KB
- fastplms/attention/_kernel_lock.py 12.1 KB
- LICENSES/FastPLMs-Apache-2.0.txt 11.3 KB
- LICENSES/biohub-transformers/LICENSE 11.2 KB
- fastplms/embeddings/feature_runs.py 11.1 KB
- fastplms/models/esmfold2/protein_reference_geometry.json 11.1 KB
- fastplms/features/conversion.py 10.7 KB
- fastplms/models/esmfold2/esmfold2_metrics.py 10.2 KB
- fastplms/models/esm_plusplus/modeling_esm_plusplus_sae.py 9.8 KB
- fastplms/models/esmfold2/esmfold2_protein_structure.py 9.7 KB
- fastplms/models/esmfold2/esmfold2_paired_msa.py 9.2 KB
- fastplms/models/esmfold2/modeling_esmfold2_classification.py 9.2 KB
- fastplms/embeddings/output.py 9.0 KB
- fastplms/embeddings/types.py 8.7 KB
- modeling_fastplms.py 8.5 KB
- fastplms/models/esmfold2/protein_utils.py 7.9 KB
- fastplms/models/esmfold2/esmfold2_output.py 7.7 KB
- fastplms/attention/_auto.py 6.9 KB
- fastplms/models/esmfold2/esmfold2_input_builder.py 6.7 KB
- fastplms/models/esmfold2/confidence_checkpoint.py 6.6 KB
- fastplms/models/esmfold2/esmfold2_constants.py 5.9 KB
- fastplms/features/receipts.py 5.3 KB
- fastplms/models/esmfold2/esmfold2_predicted_aligned_error.py 4.8 KB
- THIRD_PARTY_NOTICES.md 4.7 KB
- fastplms/models/esmfold2/embedding.py 4.5 KB
- fastplms/models/_esm_rotary.py 4.3 KB
- fastplms/models/esmfold2/esmfold2_msa_filter_sequences.py 3.9 KB
- fastplms/features/transactions.py 3.9 KB
- fastplms/models/esmfold2/esmfold2_sequential_dataclass.py 3.8 KB
- fastplms/models/esmfold2/esmfold2_parsing.py 3.7 KB
- fastplms/embeddings/tokens.py 3.3 KB
- config.json 3.1 KB
- fastplms/models/esmfold2/esmfold2_aligner.py 3.0 KB
- fastplms/models/esmfold2/esmfold2_normalize_coordinates.py 3.0 KB
- fastplms/models/esmfold2/esmfold2_constants_esm3.py 2.8 KB
- fastplms/runtime.py 2.5 KB
- fastplms/embeddings/__init__.py 2.4 KB
- fastplms/attention/__init__.py 2.3 KB
- fastplms/features/writing.py 2.1 KB
- fastplms/atomic_files.py 2.1 KB
- fastplms/models/esmfold2/__init__.py 2.0 KB
- fastplms/features/__init__.py 1.9 KB
- fastplms/__init__.py 1.8 KB
- fastplms/models/esmfold2/reproducibility.py 1.7 KB
- fastplms/models/esmfold2/attention.py 1.6 KB
- fastplms/models/esmfold2/esmfold2_system.py 1.6 KB
- fastplms/features/json_files.py 1.3 KB
- fastplms/json_files.py 1.3 KB
- fastplms/digests.py 1.2 KB
- fastplms/features/digests.py 1.2 KB
- LICENSES/biohub-esm/LICENSE.md 1.1 KB
- LICENSES/protein-ttt/LICENSE 1.0 KB
- fastplms/models/esmfold2/esmfold2_utils_types.py 1.0 KB
- LICENSES/biohub-esm/THIRD_PARTY_NOTICE.md 948 bytes
- fastplms/models/esmfold2/esmfold2_atom_indexer.py 928 bytes
- fastplms/models/esmfold2/esmfold2_types.py 876 bytes
- LICENSES/protein-ttt/SOURCE_RECORD.md 393 bytes
- requirements.txt 383 bytes
- fastplms/models/__init__.py 336 bytes
- fastplms/models/esm_plusplus/__init__.py 0 bytes
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